Person

Susanne Schaller MMSc

Ausbildung

University of Skövde, Bioinformatik, MSc
Aug. 2008 - Juni 2009
FH OÖ, Campus Hagenberg, Biomedizin Informatik, MSc
Okt. 2008 - Juli 2010
FH OÖ, Campus Hagenberg , Bioinformatik, BSc
Okt. 2005 - Juli 2008
Gymnasium der Kreuzschwester Gmunden
Sep. 1997 - Juni 2005

Berufliche Laufbahn & Aktivitäten

FH OÖ Forschungs & Entwicklungs GmbH, wissenschaftliche Mitarbeiterin, Mitarbeit an folgenden Projekten: OPMIN 2.0, Micro-Prot, DETECTOR
Okt. 2011 - dato
DNASTAR, Inc., Junior Software Engineer
Aug. 2009 - Sep. 2011
Siemens Medical Solutions Diagnostics GmbH, Data Analyst
Feb. 2008 - Juni 2008
2016
J. Karder, A. Scheibenpflug, S. Schaller, S. Wagner, M. Affenzeller - Evolutionary Procedural 2D Map Generation using Novelty Search - Companion Publication of the 2016 Genetic and Evolutionary Computation Conference, GECCO'16 Companion, Denver, Colorado, Vereinigte Staaten von Amerika, 2016, pp.… mehr
2016
D. M. Borgmann, S. Mayr, H. Polin, S. Schaller, V. Dorfer, L. Obritzberger, T. Endmayr, C. Gabriel, S. M. Winkler, J. Jacak - Single Molecule Fluorescence Microscopy and Machine Learning for Rhesus D Antigen Classification - Scientific Reports, Vol. 6, No. 32317, 2016 mehr
2016
S. Mayr, D. M. Borgmann, H. Polin, S. Schaller, T. Endmayr, L. Obritzberger, V. Dorfer, C. Gabriel, S. M. Winkler, J. Jacak - Classification of Rhesus D Antigen Expression at Single Molecule Level by High-Resolution Fluorescence Microscopy and Machine Learning - Proceedings of the Annual Winterworkshop,… mehr
2015
S. Schaller, J. Weinberger, M. Danzer, S. M. Winkler - Modelling States of Human Adaptive Immune Systems by Analyzing B- and T-Cell Receptors using Machine Learning - Lecture Notes in Computer Science LNCS 9520, Las Palmas, Gran Canaria, Spanien, 2015 mehr
2015
D. M. Borgmann, S. Mayr, H. Polin, L. Obritzberger, S. Schaller, V. Dorfer, J. Jacak, S. M. Winkler - Classifying Human Blood Samples Using Characteristics of Single Molecules and Cell Structures on Microscopy Images - Lecture Notes in Computer Science LNCS 9520, Las Palmas, Gran Canaria, Spanien, 2015,… mehr
2015
S. M. Winkler, S. Schaller, D. M. Borgmann, V. Dorfer, M. Affenzeller, J. Jacak, H. Redl, J. Weghuber - Identification and classification of objects and motions in microscopy images of biological samples using heuristic algorithms in Studies in Computational Intelligence (Contributions to Book: Part/Chapter/Section… mehr
2015
S. Schaller, J. Weinberger, R. Jimenez-Heredia, M. Danzer, S. M. Winkler - ImmunExplorer (IMEX): A detailed analysis of the health status of the immune system using NGS immunoglobulin and T cell receptor IMGT/HighV-QUEST data - 4th European Congress of Immunology, Vienna, Österreich, 2015 mehr
2015
S. Schaller, J. Weinberger, R. Jimenez-Heredia, M. Danzer, R. Oberbauer, C. Gabriel, S. M. Winkler - ImmunExplorer (IMEX): a software framework for diversity and clonality analyses of immunoglobulins and T cell receptors on the basis of IMGT/HighV-QUEST preprocessed NGS data - BMC Bioinformatics, Vol.… mehr
2015
J. Jacak, S. Schaller, D. M. Borgmann, S. M. Winkler - Characterization of the Distance Relationship Between Localized Serotonin Receptors and Glia Cells on Fluorescence Microscopy Images of Brain Tissue - MICROSCOPY AND MICROANALYSIS, Vol. 21, No. 4, 2015 mehr
2015
L. Obritzberger, D. M. Borgmann, S. Schaller, V. Dorfer, A. Lindenmair, S. Wolbank, H. Redl, S. M. Winkler - Prediction of Mineralization Degree in Human Amniotic Membrane Using Image Processing Techniques and Machine Learning - Proceedings of the 11th Metaheuristics International Conference, Agadir,… mehr
2015
L. Obritzberger, D. M. Borgmann, S. Schaller, V. Dorfer, A. Lindenmair, S. Wolbank, S. Hennerbichler, H. Redl, S. M. Winkler - Prediction of Stem Cell Differentiation in Human Amniotic Membrane Microscopy Images Using Machine Learning - Lecture Notes in Computer Science LNCS 9520, Las Palmas, Gran Canaria,… mehr
2015
M. Danzer, J. Weinberger, R. Jimenez-Heredia, S. Schaller, S. Süssner, S. M. Winkler, J. Sunzenauer, R. Oberbauer, H. Steitzer, C. Gabriel - Profiling the T- and B-cell receptor repertoire of a patient with acute kidney rejection by high-throughput sequencing - Proceedings of the 29th European Immunogenetics… mehr
2015
S. Schaller, J. Weinberger, M. Danzer, S. M. Winkler - Detailed Analysis of Clonality, Diversity, and Gene Frequency Distributions in B- & T-Cell Receptors based on NGS Data - Proceedings of the VIB Conference Series: Revolutionizing Next-Generation Sequencing: Tools and Technologies, Leuven, Belgien,… mehr
2015
S. Mayr, D. M. Borgmann, H. Polin, S. Schaller, C. Gabriel, J. Jacak, S. M. Winkler - Characterization of Rare Aberrant D Antigens on Erythrocyte Cell Surfaces using Single Molecule Fluorescence Microscopy and Machine Learning - XVI. Annual Linz Winter Workshop, JKU Linz, Österreich, 2015 mehr
2014
L. Obritzberger, S. Schaller, V. Dorfer, C. Loimayr, S. Hennerbichler, S. M. Winkler - Identification of Endothelial Cell Morphology in Cornea Using Evolution Strategies - Proceedings of the 26th European Modeling and Simulation Symposium EMSS 2014, Bordeaux, Frankreich, 2014 mehr
2014
S. Schaller, J. Weinberger, M. Danzer, C. Gabriel, R. Oberbauer, S. M. Winkler - Mathematical Modeling of the Diversity in Human B and T Cell Receptors using Machine Learning - Proceedings of the 26th European Modeling and Simulation Symposium EMSS 2014, Bordeaux, Frankreich, 2014 mehr
2014
S. Schaller, J. Weinberger, M. Danzer, S. M. Winkler - ImmunExplorer: A Framework for NGS-based Characterization and Visualization of the Human Immune System - Proceedings of the 22nd Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Boston, Vereinigte Staaten von Amerika,… mehr
2014
S. M. Winkler, S. Schaller, V. Dorfer, M. Affenzeller, G. Petz, M. Karpowicz - Data-based prediction of sentiments using heterogeneous model ensembles - Soft Computing, 2014, pp. 12 mehr
2014
J. Weinberger, R. Jimenez-Heredia, S. Schaller, M. Danzer, J. Sunzenauer, S. Süssner, H. Polin, S. M. Winkler, R. Oberbauer, C. Gabriel - Next-generation sequencing based receptor repertoire analysis reveals that expanded B- and T-cells can be found in renal tissue as well as in peripheral blood - Proceedings… mehr
2013
J. Jacak, S. Schaller, M. Sams, D. M. Borgmann, R. Silye, S. M. Winkler - Spatial Analysis Approach for the Classification of Localization Microscopy Images - Linz Winter School 2013, Linz, Österreich, 2013 mehr
2013
S. Schaller, J. Jacak, D. Gschwandtner, P. Bettelheim, S. M. Winkler - Identification of PNH Affected Cells by Classifying Motion Characteristics of Single Molecules - Proceedings of the International Workshop on Innovative Simulation for Health Care (IWISH), Athen, Griechenland, 2013, pp. 52-57 mehr
2013
S. Schaller, J. Jacak, P. Bettelheim, D. Gschwandtner, S. M. Winkler - Analyzing Motion Characteristics of Single Molecules for Providing Evidence of PNH in Microscopy Images - Proceedings of the 21st Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Berlin, Deutschland,… mehr
2013
S. Schaller, J. Jacak, M. Sams, S. M. Winkler - Statistical Analysis of the Relationship between Spots and Structures in Microscopy Images - Lecture Notes in Computer Science LNCS 8111, Las Palmas de Gran Canaria, Spanien, 2013 mehr
2012
S. Schaller, S. M. Winkler, V. Dorfer, G. Petz, H. Fürschuß - A Machine Learning Suite for Opinion Mining in Web 2.0 - Proceedings of IEEE APCAST'12 Conference, Sydney, Australien, 2012, pp. 10-13 mehr
2012
P. Lanzerstorfer, D. M. Borgmann, A. Steininger, S. Schaller, M. Brameshuber, S. Sunzenauer, O. Höglinger, J. Weghuber - Analysis of Protein-Protein Interactions in Live Cells - The Micropatterning Approach in Basic Methods in Protein Purification and Analysis, 2012 mehr
2012
G. Petz, M. Karpowicz, H. Fürschuß, A. Auinger, S. M. Winkler, S. Schaller, A. Holzinger - On Text Preprocessing for Opinion Mining Outside of Laboratory Environments - Active Media Technology, Macau, China, 2012, pp. 618-629 mehr
2012
S. Schaller, J. Jacak, D. M. Borgmann, J. Weghuber, S. M. Winkler - An Image Analysis Suite for Automated Spot Detection in Cellular and Nano Structures of Microscopy Images - Proceedings of the 20th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Long Beach, CA,… mehr
2012
S. Schaller, S. M. Winkler, J. Weghuber, M. Sams, J. Jacak - µDetect: Design of a Framework for Optimized Structure Analysis in Fluorescence Microscopy Images - Tagungsband des 6. Forschungsforums der österreichischen Fachhochschulen, Graz, Österreich, 2012, pp. 125-129 mehr
2012
D. Borgmann, J. Weghuber, S. Schaller, J. Jacak, S. M. Winkler - Identification of Patterns in Microscopy Images of Biological Samples using Evolution Strategies - Proceedings of the 24th European Modeling and Simulation Symposium EMSS 2012, Vienna, Österreich, 2012, pp. 271-276 mehr
2012
H. Fürschuß, G. Petz, P. Faschang, S. Schaller, S. M. Winkler, V. Dorfer - Qualitative Bedarfserhebung an Opinion Mining Tools im Web 2.0 - Tagungsband des 6. Forschungsforums der österreichischen Fachhochschulen, Graz, Österreich, 2012, pp. 33-36 mehr
2014
Das adaptive Immunsystem (in erster Linie repräsentiert durch B- und T-Zellen) spielt eine lebenswichtige Rolle bei der Erkennung von potenziellen Krankheitserregern, wie z.B. pathogenen Mikroorganismen… mehr
2013
Im Rahmen des Regio 13 Projekts "Transplant – Marker für humorale und zelluläre Abstoßung nach Nierentransplantation" (Konsortialführer: Blutzentrale des OÖRK) wird… mehr
2013
Fluorescence microscopy is going to become one of the core technologies for biomedical research and diagnostics. Therefore, image analysis is an increasing challenge for biomedical researchers. In the… mehr
2011
Rezeptor-Proteine auf der Oberfläche von menschlichen Zellen spielen eine Schlüsselrolle bei der Weiterleitung von Signalen aus der Umgebung in das Innere der Zelle. Ein komplexes Netzwerk dieser… mehr